Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013485.1 Corchorus capsularis cultivar CVL-1 contig13506, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12017

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
352--430
31
2.6
30
82
6
104
39
21
8
30
1.84
823--862
15
2.7
15
88
11
64
55
0
7
37
1.29
1517--1554
2
19.0
2
100
0
76
50
0
0
50
1.00
3737--3783
23
2.0
23
95
0
85
12
2
40
44
1.54
6034--6065
16
2.0
16
93
0
55
34
18
15
31
1.93
6592--6631
21
1.9
21
89
0
62
35
27
22
15
1.94
8321--8374
10
5.3
11
73
13
53
55
16
1
25
1.51
9098--9132
16
2.1
17
89
5
54
31
14
11
42
1.81
9931--10099
86
2.0
85
86
1
239
49
16
13
20
1.79
10882--10936
12
4.8
12
71
8
51
7
10
3
78
1.08
10891--10921
16
1.9
16
93
0
53
6
9
6
77
1.12
10863--10915
22
2.4
21
78
12
54
7
9
5
77
1.12

Tables:   1

The End!