Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013486.1 Corchorus capsularis cultivar CVL-1 contig13507, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30049

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
706--743
20
1.9
20
100
0
76
26
5
10
57
1.53
709--749
20
2.1
19
86
9
55
26
7
9
56
1.58
865--915
22
2.3
21
78
18
50
37
7
0
54
1.29
2171--2793
22
27.9
22
66
20
144
38
9
16
35
1.82
2810--3142
22
15.7
22
67
17
127
40
8
15
35
1.78
3014--3054
21
2.0
21
85
0
55
46
9
17
26
1.79
3572--3672
6
17.2
6
73
22
74
51
0
13
34
1.42
3568--3673
14
7.3
15
78
9
112
50
0
15
33
1.44
3566--3672
45
2.4
45
95
4
193
50
0
14
35
1.43
3572--3684
45
2.8
40
85
11
135
51
0
14
34
1.42
10545--10615
27
2.6
27
100
0
142
38
28
19
14
1.91
12816--12847
1
32.0
1
100
0
64
100
0
0
0
0.00
21801--22140
172
2.0
173
87
4
499
27
29
23
19
1.98
26954--26993
17
2.4
17
86
0
62
50
15
10
25
1.74

Tables:   1

The End!