Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013488.1 Corchorus capsularis cultivar CVL-1 contig13509, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13105

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
834--876
2
21.5
2
90
0
68
0
53
0
46
1.00
4164--4195
1
32.0
1
100
0
64
100
0
0
0
0.00
5311--5349
20
1.9
21
94
5
71
0
20
0
79
0.73
8343--8382
21
2.0
20
85
9
55
27
15
15
42
1.86
10392--10433
23
1.9
22
85
9
59
2
14
4
78
1.01

Tables:   1

The End!