Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013489.1 Corchorus capsularis cultivar CVL-1 contig13510, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38690

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
427--507
42
1.9
42
94
0
144
38
13
22
25
1.91
2603--2629
5
5.4
5
100
0
54
0
18
40
40
1.51
5343--5552
70
3.0
70
97
0
402
15
21
37
25
1.93
6486--6610
22
5.7
22
73
7
103
43
11
7
38
1.68
6489--6613
44
2.9
44
80
4
119
43
12
7
37
1.69
7493--7520
2
14.0
2
100
0
56
50
0
0
50
1.00
12757--12831
32
2.3
32
95
0
132
30
22
10
36
1.88
20774--20804
13
2.4
13
94
0
53
61
0
3
35
1.12
24269--24295
14
1.9
14
100
0
54
7
0
14
77
0.97
24996--25031
1
36.0
1
94
0
63
97
0
2
0
0.18
29424--29463
20
2.0
20
85
4
55
42
25
12
20
1.86

Tables:   1

The End!