Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013493.1 Corchorus capsularis cultivar CVL-1 contig13514, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5742

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
403--478
27
3.1
27
61
28
69
46
7
22
23
1.78
320--524
93
2.2
94
92
3
333
47
8
20
23
1.77
320--524
47
4.4
47
93
3
333
47
8
20
23
1.77
556--621
31
2.1
31
86
8
89
46
7
19
25
1.76
485--640
71
2.2
71
77
8
158
49
8
16
25
1.74
808--902
35
2.7
35
85
0
136
56
6
23
13
1.60
996--1207
21
9.6
21
72
12
124
52
8
19
19
1.71
1073--1128
15
3.9
15
74
9
62
57
5
21
16
1.59
5090--5143
20
2.7
20
91
0
81
40
11
14
33
1.82
5118--5322
101
2.0
101
81
5
236
41
6
15
36
1.73

Tables:   1

The End!