Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013494.1 Corchorus capsularis cultivar CVL-1 contig13515, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13366

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--192
47
4.0
47
90
5
289
47
7
20
23
1.76
224--289
31
2.1
31
86
8
89
46
7
19
25
1.76
153--308
71
2.2
71
77
8
158
49
8
16
25
1.74
428--467
14
2.9
14
84
0
53
52
2
22
22
1.59
476--569
35
2.7
34
83
4
134
55
6
23
14
1.63
663--861
21
8.9
21
73
11
121
52
7
20
19
1.70
740--795
15
3.9
15
74
9
62
57
5
21
16
1.59
776--894
21
5.5
22
73
20
74
52
6
19
21
1.69
2198--2246
21
2.3
21
82
6
55
14
28
16
40
1.87
6783--6836
28
1.9
28
88
7
83
48
20
12
18
1.81
12870--12906
2
18.5
2
100
0
74
51
0
0
48
1.00

Tables:   1

The End!