Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013500.1 Corchorus capsularis cultivar CVL-1 contig13521, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31093

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
125--281
74
2.1
74
92
2
262
40
8
29
21
1.83
399--439
13
3.2
13
100
0
82
36
0
7
56
1.27
1625--1650
12
2.2
12
100
0
52
50
34
15
0
1.45
2038--2080
21
2.0
21
100
0
86
27
9
23
39
1.85
6063--6129
33
2.0
33
88
0
98
38
7
26
26
1.83
10319--10658
68
5.0
68
94
0
563
27
16
22
33
1.95
25141--25612
255
1.9
255
99
0
935
38
19
15
26
1.92
29190--29585
202
2.0
202
96
0
729
33
13
20
31
1.92
30393--30695
155
2.0
154
86
3
430
20
27
28
23
1.99
30547--30810
117
2.3
117
85
0
348
20
28
29
20
1.98
30871--30951
38
2.2
37
90
2
126
18
32
23
25
1.97
30384--30944
273
2.1
271
85
2
757
20
28
27
22
1.99
30899--30975
37
2.1
38
82
2
93
19
35
22
23
1.96

Tables:   1

The End!