Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013502.1 Corchorus capsularis cultivar CVL-1 contig13523, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17222

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
223--272
24
2.0
24
88
7
73
16
18
2
64
1.39
367--435
21
3.2
22
82
10
72
20
24
5
49
1.71
339--407
36
1.9
37
85
8
99
20
24
7
47
1.75
559--595
17
2.2
17
90
0
56
29
13
8
48
1.71
693--790
16
6.1
16
74
11
101
15
20
5
59
1.55
693--780
34
2.7
31
91
5
131
14
20
4
60
1.52
1725--1750
2
13.0
2
100
0
52
50
0
0
50
1.00
1885--1932
10
4.5
10
76
23
53
25
2
0
72
0.95
2273--2309
5
8.0
5
82
17
53
78
21
0
0
0.75
2265--2309
9
5.0
9
94
5
74
77
20
2
0
0.87
2265--2309
14
3.3
14
77
22
51
77
20
2
0
0.87
12919--12950
16
2.0
16
93
0
55
21
0
6
71
1.07

Tables:   1

The End!