Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013504.1 Corchorus capsularis cultivar CVL-1 contig13525, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35884

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1901--1938
11
3.5
11
89
10
51
39
0
2
57
1.12
5146--5176
2
15.5
2
100
0
62
48
0
0
51
1.00
7097--7130
2
16.5
2
87
6
50
47
5
0
47
1.26
7349--7407
16
3.8
16
88
2
84
11
13
33
40
1.81
7380--7421
21
2.0
21
85
0
57
9
14
38
38
1.78
7726--7774
15
3.4
15
68
21
50
36
0
6
57
1.24
10001--10104
16
6.6
16
78
6
113
6
13
40
39
1.71
10013--10104
47
1.9
48
86
2
132
6
13
38
42
1.70
11303--11363
18
3.4
18
84
4
79
29
1
11
57
1.44
11293--11349
10
6.1
10
74
15
50
29
1
10
57
1.42
13650--13747
50
2.0
49
88
6
144
24
13
7
55
1.63
15910--15949
18
2.2
19
86
4
55
65
7
0
27
1.20
23640--23685
24
1.9
24
86
0
65
58
8
23
8
1.56
30396--30427
6
5.5
6
96
3
57
56
15
0
28
1.40
34059--34152
42
2.2
42
96
0
170
9
21
54
14
1.69

Tables:   1

The End!