Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013506.1 Corchorus capsularis cultivar CVL-1 contig13527, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17814

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
283--327
6
7.5
6
100
0
90
53
15
0
31
1.43
324--358
13
2.7
13
95
0
61
60
8
8
22
1.54
2749--2793
21
2.1
21
87
0
63
33
31
20
15
1.93
4416--4545
67
1.9
68
87
4
192
47
14
12
25
1.79
4538--4590
26
2.0
26
96
0
97
49
11
11
28
1.73
7538--7600
30
2.1
30
91
5
101
30
17
33
19
1.95
8805--8998
103
1.9
103
91
0
316
29
16
22
30
1.96

Tables:   1

The End!