Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013512.1 Corchorus capsularis cultivar CVL-1 contig13533, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12023

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1986--2011
13
2.0
13
100
0
52
30
46
7
15
1.74
3409--3593
41
4.5
41
91
0
282
37
12
22
27
1.90
3572--3668
36
2.6
38
72
8
101
43
10
20
25
1.83
3641--4181
76
7.1
76
95
0
967
43
10
21
24
1.84
4230--4328
36
2.8
36
81
9
105
51
11
11
26
1.70
4338--4566
37
6.2
37
89
0
314
41
7
28
22
1.81
4575--4728
36
4.2
36
88
3
220
37
9
23
29
1.87
4575--4728
73
2.1
73
87
3
222
37
9
23
29
1.87

Tables:   1

The End!