Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013526.1 Corchorus capsularis cultivar CVL-1 contig13547, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14671

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--85
2
39.5
2
88
5
79
41
2
7
48
1.45
4106--4395
106
2.7
105
89
0
400
23
20
21
34
1.96
5062--5423
145
2.4
146
91
4
566
33
16
5
44
1.71
5088--5423
75
4.5
75
92
5
567
34
17
5
42
1.73
11896--11939
22
2.0
22
86
0
61
29
25
22
22
1.99
12528--12561
8
4.1
8
85
7
50
58
14
2
23
1.50
12640--12669
5
6.2
5
92
7
53
83
0
0
16
0.65
14049--14114
33
2.0
33
88
5
98
27
10
19
42
1.84
14135--14258
33
3.8
33
84
0
158
32
9
16
41
1.81

Tables:   1

The End!