Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013527.1 Corchorus capsularis cultivar CVL-1 contig13548, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28870

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1931--1974
22
2.0
22
86
0
61
29
25
22
22
1.99
5830--5860
6
5.3
6
96
3
55
35
0
12
51
1.40
11613--11695
33
2.5
32
83
12
98
8
27
42
21
1.82
11640--11719
33
2.4
33
85
0
97
10
27
40
22
1.86
17280--17358
28
2.6
30
82
11
99
44
16
10
29
1.80
25795--25871
30
2.4
33
79
14
90
38
16
7
36
1.78
25860--25964
33
3.2
33
83
2
140
45
19
9
25
1.80
26456--26562
33
3.2
33
85
2
135
22
40
28
8
1.83

Tables:   1

The End!