Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013529.1 Corchorus capsularis cultivar CVL-1 contig13550, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22741

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52--97
10
4.7
10
86
10
60
32
0
15
52
1.43
52--97
19
2.3
20
85
10
60
32
0
15
52
1.43
5085--5109
9
2.8
9
100
0
50
24
44
20
12
1.85
8125--8182
30
1.9
30
89
6
91
31
18
29
20
1.97
10731--10787
30
1.9
30
92
7
98
21
35
15
28
1.94
11196--11334
33
4.2
33
79
6
122
42
22
8
26
1.82
19941--19986
21
2.2
21
85
11
60
28
17
21
32
1.96
20835--20868
17
2.0
17
94
0
59
55
14
5
23
1.61
20942--20971
5
5.8
5
92
7
51
80
0
0
20
0.72
22352--22460
33
3.3
32
77
7
121
26
8
21
44
1.80
22479--22560
27
2.7
32
76
21
102
30
10
17
41
1.83

Tables:   1

The End!