Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013530.1 Corchorus capsularis cultivar CVL-1 contig13551, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21016

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1672--1715
22
2.0
22
86
0
61
29
25
22
22
1.99
6304--6387
33
2.7
31
87
5
107
10
25
41
22
1.86
7289--7351
30
2.1
30
91
5
101
19
36
15
28
1.92
7722--7797
33
2.3
33
86
0
107
42
21
11
25
1.86
7734--7804
33
2.2
33
92
0
115
39
15
11
33
1.83
7790--7927
33
4.2
33
81
5
127
42
21
8
26
1.82
9400--10129
372
2.0
370
84
4
968
33
20
15
30
1.94
10667--10724
30
1.9
30
85
0
80
17
31
27
24
1.97
11740--11775
19
1.9
18
88
5
54
41
2
22
33
1.68
12372--12407
18
2.1
17
94
5
63
11
16
8
63
1.49
15128--15213
33
2.6
33
84
0
118
29
8
19
43
1.80
18959--21016
154
13.4
154
90
2
3230
23
18
17
40
1.91

Tables:   1

The End!