Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013533.1 Corchorus capsularis cultivar CVL-1 contig13554, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24316

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--43
2
21.0
2
95
4
77
48
2
0
48
1.14
182--224
11
3.9
11
90
0
68
46
6
4
41
1.51
178--224
22
2.1
22
96
0
85
46
6
4
42
1.48
2872--2974
30
3.5
30
85
2
147
25
16
10
47
1.78
3163--3220
29
2.0
30
82
3
73
43
13
18
24
1.87
5553--5590
11
3.5
11
85
10
51
57
2
0
39
1.12
23255--23292
2
19.0
2
100
0
76
50
0
0
50
1.00

Tables:   1

The End!