Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013541.1 Corchorus capsularis cultivar CVL-1 contig13562, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29157

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4854--5023
31
5.4
31
80
9
173
31
26
23
18
1.97
4858--5033
96
1.8
96
83
2
237
33
26
22
17
1.96
7918--7943
3
8.7
3
100
0
52
34
0
0
65
0.93
11991--12031
6
7.0
6
78
15
50
80
17
2
0
0.82
11991--12040
11
4.6
11
80
14
59
78
18
4
0
0.91
17878--17960
42
2.0
42
97
0
157
31
7
21
39
1.81
18512--18546
15
2.2
16
90
5
54
8
14
2
74
1.17
25886--25917
2
16.0
2
100
0
64
50
0
0
50
1.00
28064--28128
31
2.1
31
94
0
112
21
13
21
43
1.87

Tables:   1

The End!