Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013546.1 Corchorus capsularis cultivar CVL-1 contig13567, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42376

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1769--1948
38
4.7
38
88
5
281
23
18
35
22
1.96
13532--13607
9
8.3
9
81
15
61
21
1
0
77
0.84
13537--13595
3
20.7
3
83
10
70
23
0
0
76
0.79
13533--13607
29
2.6
28
87
8
105
21
1
0
77
0.85
13542--13601
32
1.9
31
93
3
102
21
0
0
78
0.75
15710--15788
5
16.4
5
78
11
76
16
0
5
78
0.92
15713--15768
17
3.1
17
85
12
60
16
0
3
80
0.85
30499--30538
21
2.0
20
85
14
55
75
7
5
12
1.18
33643--33713
37
2.0
35
89
10
110
21
8
25
45
1.80
36049--36106
29
2.1
28
90
6
91
32
5
12
50
1.62

Tables:   1

The End!