Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013549.1 Corchorus capsularis cultivar CVL-1 contig13570, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26165

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2092--2180
32
2.8
32
87
0
115
10
20
37
32
1.86
2047--2183
16
8.6
16
72
12
75
13
21
32
32
1.92
2211--2253
15
2.9
15
82
0
59
20
13
37
27
1.91
20208--20262
26
2.1
26
100
0
110
50
3
7
38
1.48
20384--20449
27
2.4
27
80
12
73
46
3
6
43
1.43
20528--20576
23
2.1
23
92
0
80
51
4
8
36
1.51
20906--21703
350
2.3
350
88
1
1179
32
17
17
31
1.94
21986--22029
22
2.0
22
86
8
63
40
13
4
40
1.65
22027--22211
22
8.5
21
68
12
79
34
15
10
40
1.82
22050--22211
22
7.5
22
67
8
89
35
14
10
40
1.80
22171--22224
22
2.4
22
81
3
72
44
16
9
29
1.79
25104--25208
33
3.2
33
93
0
183
33
9
18
39
1.83

Tables:   1

The End!