Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013551.1 Corchorus capsularis cultivar CVL-1 contig13572, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18544

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
504--563
23
2.6
23
92
5
86
60
0
5
35
1.19
14738--14785
23
2.1
22
88
3
69
0
0
14
85
0.60
14746--14784
14
2.8
14
92
7
62
0
0
12
87
0.55
14738--14785
8
6.2
8
81
15
57
0
0
14
85
0.60
14742--14781
19
2.2
19
90
4
64
0
0
15
85
0.61
17770--17809
7
5.9
7
85
5
55
15
0
5
80
0.88
17770--17809
13
3.0
13
92
3
62
15
0
5
80
0.88
17770--17807
20
1.9
20
88
0
58
13
0
5
81
0.85

Tables:   1

The End!