Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013559.1 Corchorus capsularis cultivar CVL-1 contig13580, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48012

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5391--5423
17
1.9
17
93
0
57
18
18
6
57
1.60
18809--18874
30
2.2
30
89
2
98
27
15
25
31
1.95
19899--20040
71
2.0
71
97
0
266
35
23
12
28
1.92
22162--22210
22
2.3
22
89
6
75
20
12
16
51
1.76
23757--23876
39
3.1
39
84
4
143
39
20
12
27
1.89
23809--23888
40
2.0
40
92
0
133
42
13
15
28
1.85

Tables:   1

The End!