Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013560.1 Corchorus capsularis cultivar CVL-1 contig13581, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24698

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1122--1153
3
10.7
3
100
0
64
65
0
0
34
0.93
2527--2552
5
5.2
5
100
0
52
19
0
0
80
0.71
5088--5128
20
2.0
20
100
0
82
34
19
21
24
1.97
13220--13277
13
4.5
13
75
14
57
60
8
1
29
1.36
13220--13277
26
2.2
26
84
6
73
60
8
1
29
1.36
19202--19260
30
1.9
32
82
6
77
1
33
3
61
1.23
22978--23014
19
2.0
18
89
5
56
43
2
21
32
1.67
24335--24365
6
5.3
6
96
3
55
35
0
12
51
1.40

Tables:   1

The End!