Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013562.1 Corchorus capsularis cultivar CVL-1 contig13583, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15067

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2690--2724
14
2.5
14
90
9
54
34
14
5
45
1.68
5454--5506
26
2.0
26
89
10
81
24
54
15
5
1.62
5475--5506
17
1.9
17
93
6
57
25
56
15
3
1.54
5560--5604
16
2.8
17
86
6
58
24
40
22
13
1.90
5783--5819
14
2.7
14
87
4
58
67
0
13
18
1.23
6178--6293
16
7.6
15
76
10
101
35
36
18
10
1.85
6209--6285
31
2.5
32
87
4
113
36
38
15
9
1.79
9104--9138
13
2.6
14
90
4
54
62
34
2
0
1.10
13410--13825
49
8.6
48
79
5
365
22
26
17
32
1.96
13410--13825
97
4.3
98
80
5
382
22
26
17
32
1.96
13410--13778
194
1.9
195
81
5
442
22
27
17
32
1.96
14675--14728
1
54.0
1
92
0
90
96
0
1
1
0.27

Tables:   1

The End!