Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013568.1 Corchorus capsularis cultivar CVL-1 contig13589, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23889

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
276--546
133
2.0
135
96
1
501
17
41
22
18
1.90
764--805
9
4.7
9
80
8
50
0
2
9
88
0.61
3750--3835
36
2.4
35
88
5
127
27
18
8
45
1.78
3750--3850
36
2.9
34
83
9
109
26
20
6
45
1.76
3850--4436
36
16.7
35
84
7
712
26
21
9
42
1.83
3872--4438
211
2.7
207
87
6
800
25
22
8
43
1.82
3849--4435
247
2.4
245
86
5
785
26
22
9
42
1.83
4440--4781
11
31.6
11
80
5
286
19
21
8
51
1.73
4862--4973
40
2.8
40
87
1
152
25
10
9
54
1.65
4864--4990
40
3.2
40
76
8
125
25
13
8
52
1.68
9082--9191
57
1.9
57
100
0
220
38
7
12
41
1.71
14062--14093
2
16.0
2
100
0
64
50
0
0
50
1.00
22823--22878
7
7.9
7
94
4
85
28
39
14
17
1.89

Tables:   1

The End!