Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013572.1 Corchorus capsularis cultivar CVL-1 contig13593, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11656

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4406--4460
27
2.0
27
86
6
76
12
20
7
60
1.56
6915--7001
46
1.9
45
92
2
147
57
12
20
9
1.62
6967--7035
34
2.0
34
91
0
111
55
13
21
10
1.67
6980--7039
17
3.5
17
71
8
59
58
10
23
8
1.57
6978--7051
34
2.2
33
81
9
80
58
8
22
10
1.58
8880--8961
36
2.3
35
85
8
112
36
8
21
32
1.84
8993--9086
36
2.6
36
88
1
145
38
10
21
29
1.87
8881--9116
125
1.9
125
92
0
400
36
11
23
28
1.90
9049--9605
117
4.8
117
85
4
660
34
13
24
27
1.93
9049--9609
59
9.6
58
88
3
643
34
13
24
27
1.93
9892--9960
27
2.5
27
88
2
93
15
14
26
43
1.85

Tables:   1

The End!