Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013576.1 Corchorus capsularis cultivar CVL-1 contig13597, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8360

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5069--5127
25
2.5
24
88
5
84
35
22
0
42
1.54
5137--5203
26
2.6
26
92
0
116
53
10
2
32
1.50
5216--5264
10
5.0
10
80
14
66
57
12
0
30
1.36
5211--5264
18
2.8
18
91
8
81
55
11
0
33
1.35
6435--6472
11
3.5
11
85
10
51
57
2
0
39
1.12
6491--6520
15
2.0
15
100
0
60
20
0
26
53
1.46
7078--7109
12
2.4
14
90
10
50
46
3
9
40
1.52

Tables:   1

The End!