Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013577.1 Corchorus capsularis cultivar CVL-1 contig13598, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22815

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3366--3426
29
2.1
30
84
9
81
32
3
18
45
1.65
4181--4226
23
2.0
23
86
0
65
58
6
6
28
1.48
10053--10083
14
2.2
14
94
0
53
54
6
0
38
1.26
10265--10326
27
2.3
27
91
0
97
29
38
17
14
1.89
10784--10820
18
2.2
18
86
13
53
54
0
0
45
1.00
10848--10995
32
4.6
32
76
10
106
15
35
37
10
1.83
11092--11124
14
2.4
14
94
0
57
24
24
3
48
1.65
14549--14591
12
3.5
12
90
6
68
27
23
13
34
1.93
17112--17144
17
1.9
17
93
0
57
27
36
9
27
1.87
18373--18420
2
24.0
2
91
0
69
47
6
0
45
1.27
18363--18410
14
3.4
14
82
0
69
45
12
0
41
1.42
18363--18420
28
2.1
28
100
0
116
46
10
0
43
1.38

Tables:   1

The End!