Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013578.1 Corchorus capsularis cultivar CVL-1 contig13599, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22594

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9906--9965
22
2.9
22
76
19
65
43
3
18
35
1.67
9916--9953
19
2.1
18
90
5
58
44
2
21
31
1.66
15099--15158
22
2.9
22
76
19
65
43
3
18
35
1.67
15109--15146
19
2.1
18
90
5
58
44
2
21
31
1.66
16492--16528
6
6.3
6
93
3
58
35
2
10
51
1.51
16546--16575
15
2.0
15
93
0
51
13
10
6
70
1.34
21338--21380
18
2.6
17
82
13
54
34
13
13
37
1.85

Tables:   1

The End!