Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013581.1 Corchorus capsularis cultivar CVL-1 contig13602, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13598

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
124--157
2
17.0
2
93
0
59
50
2
0
47
1.16
2945--2979
17
2.1
17
89
5
54
57
11
14
17
1.66
3015--3040
13
2.0
13
100
0
52
46
23
7
23
1.78
4763--4839
33
2.3
34
84
2
93
19
6
23
50
1.70
6351--6397
19
2.5
19
100
0
94
53
31
0
14
1.42
9953--10106
80
1.9
80
89
2
238
49
24
15
11
1.77

Tables:   1

The End!