Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013589.1 Corchorus capsularis cultivar CVL-1 contig13610, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22788

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
627--653
10
2.7
10
100
0
54
0
0
7
92
0.38
736--769
8
4.1
8
85
7
50
23
2
14
58
1.50
1674--1702
10
2.9
10
100
0
58
0
20
51
27
1.47
1685--1824
33
4.2
32
78
10
113
10
27
42
20
1.83
5544--5689
22
6.7
22
70
15
99
39
8
13
39
1.75
6633--6710
31
2.5
31
81
12
79
35
11
3
48
1.58
6807--6902
38
2.6
39
83
6
119
15
16
10
57
1.65
8754--8795
19
2.2
19
100
0
84
47
0
14
38
1.44
18829--18861
16
2.1
16
100
0
66
18
30
12
39
1.87
19566--19656
25
3.5
25
95
4
155
46
16
7
29
1.75

Tables:   1

The End!