Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013593.1 Corchorus capsularis cultivar CVL-1 contig13614, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30206

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3164--3191
13
2.2
13
100
0
56
46
0
0
53
1.00
6803--6836
16
2.1
16
88
0
50
41
44
8
5
1.60
6849--6923
16
4.8
16
80
3
89
41
40
12
6
1.68
6849--6923
31
2.4
32
86
2
98
41
40
12
6
1.68
7987--8015
2
15.0
2
92
7
51
48
0
0
51
1.00
8317--8373
15
3.6
15
75
17
53
40
36
15
7
1.75
11452--11580
33
3.8
33
79
7
152
27
22
5
44
1.74
11603--12333
74
9.8
74
87
6
941
25
22
7
43
1.80
11603--12334
113
6.5
113
87
6
941
25
22
7
43
1.80
11603--12333
187
3.9
183
90
3
1049
25
22
7
43
1.80
17820--18461
49
13.2
49
88
1
898
30
12
32
23
1.92
19463--19534
34
2.1
34
97
0
135
16
25
13
44
1.85
29147--29222
40
1.9
40
88
0
116
30
11
14
43
1.81
29361--29404
21
2.1
21
87
8
63
18
34
9
38
1.82
29620--29695
32
2.3
33
81
2
91
6
35
40
17
1.75

Tables:   1

The End!