Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013601.1 Corchorus capsularis cultivar CVL-1 contig13622, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41852

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7427--7495
30
2.3
30
82
0
84
37
21
26
14
1.92
8964--8997
11
3.2
10
84
15
50
50
17
2
29
1.61
16151--16213
30
2.1
30
91
5
101
19
33
17
30
1.95
17331--17376
21
2.2
21
84
0
56
13
34
28
23
1.92
17337--17382
21
2.2
21
88
0
65
8
34
28
28
1.87
18252--18282
6
5.3
6
96
3
55
54
12
0
32
1.38
19634--19667
11
3.2
10
84
15
50
50
17
0
32
1.47
22083--22133
20
2.4
21
80
6
68
21
5
5
66
1.35
25607--25635
2
14.5
2
100
0
58
51
0
0
48
1.00
27998--28027
6
5.0
6
91
0
51
86
0
13
0
0.57
28080--28112
12
2.8
12
95
0
57
81
0
15
3
0.80
28525--28558
6
5.8
6
96
3
61
35
0
11
52
1.38
28942--29027
42
2.1
41
80
8
95
30
8
4
56
1.48
32913--32994
33
2.5
34
76
9
91
12
29
37
20
1.89
36043--36078
19
1.9
18
88
5
54
41
2
22
33
1.68

Tables:   1

The End!