Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013618.1 Corchorus capsularis cultivar CVL-1 contig13639, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13376

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2833--2924
16
5.9
16
75
10
91
18
20
5
55
1.62
2833--2902
15
4.6
14
71
16
50
18
20
2
58
1.51
2833--2913
31
2.6
31
92
0
135
18
19
3
58
1.54
2962--3022
20
3.1
19
69
19
52
24
18
6
50
1.70
3025--3207
26
7.6
25
65
23
97
29
16
6
48
1.70
2975--3427
71
6.3
71
95
0
771
29
16
5
48
1.68
6346--6385
3
13.3
3
100
0
80
32
0
0
67
0.91
8368--8400
8
4.1
8
85
14
50
60
15
0
24
1.35
8472--8508
11
3.5
11
82
17
51
83
0
0
16
0.64

Tables:   1

The End!