Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013621.1 Corchorus capsularis cultivar CVL-1 contig13642, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26093

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2347--2385
13
3.0
13
88
7
53
76
0
17
5
0.96
7596--7679
25
3.5
25
68
22
81
36
7
19
36
1.79
7535--7680
45
3.2
45
91
1
231
38
6
18
36
1.76
8329--8379
15
3.5
14
81
7
57
80
0
17
1
0.81
8337--8383
19
2.7
17
83
9
60
82
0
17
0
0.66
9528--9774
35
7.0
35
86
2
309
17
19
21
42
1.89
9528--9774
105
2.3
107
85
7
342
17
19
21
42
1.89
12488--12519
2
16.0
2
93
0
55
50
3
0
46
1.17
13653--13681
14
2.1
14
93
6
51
75
0
20
3
0.94
13715--13756
14
2.9
14
96
3
75
35
4
9
50
1.56
14898--14938
22
1.9
21
85
5
55
26
26
21
24
2.00
24787--24833
19
2.5
19
96
0
85
27
23
29
19
1.98

Tables:   1

The End!