Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013629.1 Corchorus capsularis cultivar CVL-1 contig13650, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9997

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1671--1760
27
3.5
26
75
9
85
26
26
12
34
1.92
1671--2221
50
11.0
50
88
2
793
24
27
11
36
1.90
1904--1983
23
3.3
23
65
19
63
18
30
12
38
1.88
1671--2221
251
2.2
251
90
1
856
24
27
11
36
1.90
4044--4114
32
2.2
33
87
5
99
7
19
12
60
1.55
6693--6747
27
2.0
27
89
0
83
60
5
20
14
1.54
9536--9564
13
2.1
14
93
6
51
48
10
20
20
1.79

Tables:   1

The End!