Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013642.1 Corchorus capsularis cultivar CVL-1 contig13663, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55613

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8898--8943
21
2.2
21
88
0
65
41
2
0
56
1.11
12521--12564
23
1.9
23
90
0
70
34
11
34
20
1.88
15421--15458
20
1.9
20
94
0
67
31
15
0
52
1.43
15810--15853
23
1.9
23
100
0
88
43
18
31
6
1.76
15929--16022
46
2.0
46
93
0
161
29
17
19
34
1.94
16309--16455
75
2.0
74
93
1
249
32
17
22
27
1.96
16440--16485
24
2.0
23
95
4
83
34
21
17
26
1.95
17489--17514
2
13.0
2
100
0
52
50
0
0
50
1.00
24389--24557
82
2.1
80
86
2
239
40
12
11
36
1.79
38450--38503
28
1.9
28
85
7
74
24
12
11
51
1.72
38450--38510
28
2.1
28
82
8
70
24
13
11
50
1.74
51356--51387
3
10.7
3
100
0
64
65
0
0
34
0.93
54696--54762
31
2.2
31
89
5
102
49
11
17
20
1.79

Tables:   1

The End!