Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013649.1 Corchorus capsularis cultivar CVL-1 contig13670, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25262

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--3401
334
10.3
331
79
6
3442
31
15
17
35
1.91
1--3389
668
5.1
666
89
2
4938
31
15
17
35
1.91
4476--4817
49
7.1
49
92
2
529
36
25
29
8
1.85
10174--10214
2
20.5
2
94
0
73
51
0
0
48
1.00
13320--13565
121
2.0
121
100
0
492
32
20
13
33
1.92
22634--23380
331
2.3
332
91
1
1207
28
23
18
29
1.98

Tables:   1

The End!