Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013654.1 Corchorus capsularis cultivar CVL-1 contig13675, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30527

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1967--1996
14
2.1
15
93
6
53
90
0
10
0
0.47
3153--3178
13
2.0
13
100
0
52
38
0
15
46
1.46
5262--5288
6
4.5
6
100
0
54
48
18
14
18
1.82
17078--17119
3
14.0
3
100
0
84
33
0
0
66
0.92
19825--20125
152
2.0
152
95
1
541
40
17
17
24
1.91
20598--20745
80
1.9
80
92
0
251
32
22
15
29
1.95
23900--23930
15
2.0
16
93
6
55
83
16
0
0
0.64
29241--29628
193
2.0
195
84
3
512
36
12
16
34
1.87

Tables:   1

The End!