Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013656.1 Corchorus capsularis cultivar CVL-1 contig13677, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5518

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
329--719
195
2.0
195
86
2
554
34
12
15
37
1.86
4--1235
516
2.4
515
88
1
1806
33
14
16
35
1.89
872--1428
194
2.9
193
86
3
715
35
14
14
35
1.87
1875--2460
195
3.0
194
86
3
768
35
12
15
36
1.85
2263--3094
323
2.6
321
85
5
1081
33
14
16
36
1.88
2939--3493
196
2.9
194
89
3
823
35
12
15
35
1.86
3310--4107
320
2.5
313
86
5
1032
34
13
16
34
1.88
4129--4966
320
2.6
320
85
3
1057
33
14
17
34
1.91
3114--5052
834
2.3
829
89
2
2915
34
14
17
34
1.89

Tables:   1

The End!