Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013658.1 Corchorus capsularis cultivar CVL-1 contig13679, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71648

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
99--135
17
2.2
17
95
0
65
51
0
18
29
1.47
567--608
21
2.0
21
90
0
66
73
2
2
21
1.06
837--873
17
2.2
17
95
0
65
51
0
18
29
1.47
16669--16761
48
1.9
48
91
0
150
33
3
22
40
1.70
20190--20218
2
14.5
2
100
0
58
51
0
48
0
1.00
33962--34000
13
3.0
13
92
7
62
17
15
23
43
1.87
42594--42627
6
5.7
6
100
0
68
17
14
50
17
1.79
44262--44294
14
2.4
14
94
0
57
36
12
15
36
1.84
46369--46416
22
2.2
22
92
0
78
45
4
22
27
1.70
49438--49500
30
2.1
30
93
0
108
41
23
26
7
1.82
51593--51718
63
2.0
63
92
0
207
28
12
35
23
1.91

Tables:   1

The End!