Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013664.1 Corchorus capsularis cultivar CVL-1 contig13685, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18545

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
220--252
15
2.2
15
94
0
57
36
18
12
33
1.88
642--790
31
4.8
31
86
0
163
33
23
22
20
1.97
3784--3822
19
2.1
19
95
0
69
33
10
25
30
1.89
4728--4818
46
2.0
46
93
0
155
42
6
19
30
1.77
5754--5780
2
13.5
2
100
0
54
51
0
0
48
1.00
10432--10464
2
16.5
2
100
0
66
51
0
0
48
1.00
11302--11368
33
2.0
33
100
0
134
23
8
11
55
1.64
17196--17222
13
2.1
13
100
0
54
22
14
0
62
1.31
18163--18191
12
2.3
13
94
5
51
72
0
0
27
0.85
18372--18441
17
4.2
17
66
23
58
44
1
5
48
1.35
18383--18454
2
37.0
2
76
20
73
47
1
4
47
1.30

Tables:   1

The End!