Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013672.1 Corchorus capsularis cultivar CVL-1 contig13693, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47357

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12394--12482
44
2.0
44
95
0
160
40
23
11
24
1.87
13484--13725
122
2.0
121
95
0
439
47
20
7
23
1.76
16843--16871
15
1.9
15
100
0
58
6
0
17
75
1.01
22085--22160
30
2.5
31
80
6
102
30
25
11
32
1.91
34192--34229
11
3.5
11
85
10
51
57
2
0
39
1.12
40383--40519
65
2.1
65
82
2
159
15
37
35
12
1.85
40648--40682
11
3.2
11
87
0
52
34
0
0
65
0.93
42197--42232
15
2.3
16
90
4
56
61
8
0
30
1.26
42810--42967
79
2.0
79
100
0
316
34
20
18
26
1.96
43606--43641
13
2.6
15
83
16
51
58
13
0
27
1.36
45242--45282
6
6.8
6
100
0
82
82
0
17
0
0.66

Tables:   1

The End!