Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013673.1 Corchorus capsularis cultivar CVL-1 contig13694, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21717

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
218--288
28
2.6
28
80
13
85
36
4
16
42
1.68
4252--4700
167
2.7
164
82
4
526
40
15
14
29
1.87
4813--4852
2
20.0
2
94
0
71
50
0
2
47
1.14
5605--5647
22
1.9
23
90
4
70
44
4
13
37
1.65
6214--6240
11
2.5
11
100
0
54
55
18
14
11
1.68
10247--10291
22
2.0
22
91
0
72
8
31
8
51
1.64
11133--11157
13
1.9
13
100
0
50
44
0
0
56
0.99
11283--11328
3
15.3
3
95
0
83
65
0
2
32
1.05
12723--12766
3
14.7
3
81
9
54
61
0
4
34
1.16
14050--14093
22
2.0
22
86
8
63
59
2
2
36
1.23
15832--16119
146
2.0
146
93
2
490
44
17
13
24
1.85
17505--17545
21
2.0
21
85
9
57
2
41
2
53
1.27
18624--18660
2
19.0
2
94
5
67
48
0
0
51
1.00
19811--19975
54
3.1
54
100
0
330
43
24
10
21
1.85

Tables:   1

The End!