Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013674.1 Corchorus capsularis cultivar CVL-1 contig13695, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27665

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
506--541
2
18.0
2
100
0
72
50
0
0
50
1.00
8601--8642
21
2.0
21
90
0
66
42
19
16
21
1.89
11144--11196
24
2.2
24
86
6
81
49
1
7
41
1.42
11688--11733
15
2.9
16
77
6
58
41
30
15
13
1.85
14004--14060
28
2.0
28
89
0
87
22
19
14
43
1.86
14751--14807
28
2.0
29
89
3
89
42
14
19
24
1.88
16640--16680
20
2.0
20
100
0
82
34
9
0
56
1.32
20815--20852
15
2.4
17
83
16
55
39
0
2
57
1.12
21246--24195
334
8.9
331
74
10
1922
34
13
14
37
1.86
21940--21974
11
3.0
12
91
8
63
51
5
8
34
1.56
23676--23702
2
13.5
2
100
0
54
48
0
0
51
1.00
26597--27462
331
2.6
329
78
8
788
34
12
14
38
1.84

Tables:   1

The End!