Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013676.1 Corchorus capsularis cultivar CVL-1 contig13697, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13517

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9--2983
333
9.1
328
74
10
2014
36
14
14
33
1.87
3752--3798
8
6.2
8
85
14
73
51
0
23
25
1.49
4345--4374
15
1.9
16
93
6
53
36
6
6
50
1.55
5981--6031
24
2.1
24
85
7
68
45
1
0
52
1.12
8956--9042
43
2.0
44
97
2
167
39
22
8
29
1.83
9758--9816
29
2.1
28
80
3
64
35
0
3
61
1.13

Tables:   1

The End!