Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013683.1 Corchorus capsularis cultivar CVL-1 contig13704, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53090

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31561--31620
24
2.4
25
91
5
104
23
16
6
53
1.66
38460--38497
3
12.7
3
100
0
76
65
0
0
34
0.93
40672--40749
29
2.7
28
77
15
86
39
29
14
16
1.88
43924--43972
25
2.0
24
88
4
71
2
44
24
28
1.65
44221--44271
27
2.0
26
84
7
68
1
29
1
66
1.13
50822--50856
2
17.5
2
88
11
54
51
0
2
45
1.16

Tables:   1

The End!