Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013686.1 Corchorus capsularis cultivar CVL-1 contig13707, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44948

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
756--927
82
2.1
82
98
0
335
15
25
25
33
1.95
3179--3241
33
1.9
33
86
0
90
17
36
31
14
1.90
3861--3907
24
1.9
24
86
4
67
76
6
6
10
1.15
11176--11271
27
3.6
27
80
5
122
42
12
21
22
1.87
11176--11299
54
2.3
54
95
0
221
42
12
21
22
1.87
11203--11298
27
3.6
27
81
5
131
44
12
19
22
1.84
14968--15026
29
2.0
29
100
0
118
32
3
33
30
1.74
18924--18991
32
2.1
32
97
0
127
16
14
26
42
1.86
29175--29201
14
1.9
14
100
0
54
44
40
7
7
1.60
33163--33236
33
2.2
33
82
0
94
9
13
35
41
1.77
37166--37216
26
2.0
26
84
0
66
15
15
15
52
1.74
38045--38095
20
2.5
20
84
12
68
11
5
13
68
1.37
43278--43325
2
24.5
2
87
12
73
50
0
2
47
1.12
43524--43554
2
15.5
2
100
0
62
48
0
0
51
1.00

Tables:   1

The End!