Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013687.1 Corchorus capsularis cultivar CVL-1 contig13708, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17610

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2546--2620
29
2.6
29
97
0
141
40
6
32
21
1.79
5108--5144
11
3.4
11
92
0
65
45
8
2
43
1.47
8667--8698
2
16.0
2
100
0
64
50
0
0
50
1.00
9618--9710
46
2.0
46
95
0
168
22
43
11
22
1.86
10437--10505
2
38.0
2
74
18
53
49
0
1
49
1.09
10451--10507
17
3.3
18
82
4
73
52
0
0
47
1.00
10471--10500
11
2.7
11
100
0
60
60
0
0
40
0.97
17555--17586
2
16.0
2
100
0
64
50
0
0
50
1.00

Tables:   1

The End!