Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013689.1 Corchorus capsularis cultivar CVL-1 contig13710, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40784

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9233--9259
14
1.9
14
100
0
54
37
18
0
44
1.50
9975--10158
22
8.4
22
70
4
120
41
10
13
34
1.79
9992--10158
44
3.8
43
78
3
172
40
11
11
36
1.78
9992--10189
88
2.2
88
82
0
234
42
10
13
34
1.77
10326--10424
22
4.5
22
71
12
71
34
6
15
44
1.71
10457--10513
22
2.6
23
81
10
66
38
10
12
38
1.77
10382--10520
65
2.1
66
80
9
151
37
9
15
38
1.79
15788--15816
15
2.0
15
93
6
51
55
0
0
44
0.99
17286--17317
15
2.1
15
100
0
64
28
18
12
40
1.87
19119--19145
2
13.5
2
100
0
54
48
0
0
51
1.00
20896--20921
3
8.7
3
100
0
52
34
0
0
65
0.93
22770--22794
2
12.5
2
100
0
50
48
0
0
52
1.00
22987--23357
183
2.0
183
93
1
636
32
14
21
31
1.93
23802--23866
31
2.1
31
94
5
114
44
23
13
18
1.85

Tables:   1

The End!