Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013696.1 Corchorus capsularis cultivar CVL-1 contig13717, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22495

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2739--2808
29
2.4
30
73
9
81
45
15
1
37
1.55
6009--6128
64
1.9
64
98
0
231
25
10
20
43
1.83
10340--10431
45
2.0
46
91
2
150
33
17
17
31
1.93
11099--11241
27
5.3
27
81
3
153
10
37
20
31
1.86
11096--11244
54
2.7
55
85
3
194
10
37
20
32
1.86
15826--15858
2
16.5
2
100
0
66
48
0
0
51
1.00
16313--16337
2
12.5
2
100
0
50
52
48
0
0
1.00
18273--18298
2
13.0
2
100
0
52
50
0
0
50
1.00
21677--21733
21
2.7
21
91
0
96
49
26
8
15
1.74

Tables:   1

The End!